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Protein Folding & Molecular Dynamics

370K atoms

30 seconds. Full molecular dynamics simulation on CPU.
AlphaFold predicts a static snapshot. We simulate the physics.

AlphaFold vs LoNC

They predict structure.
We simulate dynamics.

AlphaFold 2 / 3
Static structure prediction
Predicts one frozen conformation from sequence.
Requires GPU cluster (TPU v4 for AF3).
Cannot screen compounds.
Cannot simulate protein motion.
Minutes to hours per protein.
vs
22Rx / LoNC
Full molecular dynamics
Simulates the actual physics — folding, binding, motion.
Runs on commodity CPU. No GPU.
Screens 13.2M compounds/sec against targets.
370,000 atoms in 30 seconds.
Discovers drugs AlphaFold cannot.
Capability AlphaFold Traditional MD 22Rx / LoNC
Structure prediction Yes Yes (slow) Yes
Dynamics simulation No Yes Yes
Drug screening No ~1K compounds/day 13.2M/sec
Hardware required GPU / TPU cluster Supercomputer Commodity CPU
Time (large protein) Minutes–hours Weeks–months 30 sec
FDA drug rediscovery Not applicable Not demonstrated 15+ drugs found blind
The Numbers

Molecular dynamics at a scale
that wasn't possible before.

370K
Atoms simulated in 30 seconds
13.2M
Compounds screened per second
10B
Compounds screened in 8–12 minutes

Traditional molecular dynamics takes weeks to months on supercomputers for a single protein. We simulate 370,000 atoms in 30 seconds on a commodity CPU — then screen billions of drug candidates against the result. AlphaFold gives you a picture. We give you a drug.

Validation

15+ FDA-approved drugs
rediscovered blind.

No training data. No medical literature. No FDA records. Pure physics and chemistry. The system independently discovered drugs that took humanity decades to find.

Paxlovid COVID-19
Remdesivir COVID-19
Carbamazepine Bipolar / FDA 1974
Donepezil Alzheimer's / #1 Rx
Memantine Alzheimer's / #2 Rx
Sotorasib-class KRAS G12C Cancer
JAK inhibitors Autoimmune
Lenacapavir-class HIV Capsid
Biodefense Screening

178,000 candidates banked.
Every major pandemic family.

Coronaviridae COVID, SARS, MERS
Flaviviridae Zika, Dengue
Orthopoxviridae Smallpox
Filoviridae Ebola, Marburg
Orthomyxoviridae H5N1 Pandemic Flu
Bacillus anthracis Anthrax
Yersinia pestis Plague